| Tài liệu tham khảo |
Loại |
Chi tiết |
| [1] J. C. Setubal, J. Meidanis, and Setubal-Meidanis, Introduction to computa- tional molecular biology. No. 04; QH506, S4., PWS Pub. Boston, 1997 |
Sách, tạp chí |
| Tiêu đề: |
Introduction to computational molecular biology |
| Tác giả: |
J. C. Setubal, J. Meidanis, Setubal-Meidanis |
| Nhà XB: |
PWS Pub. Boston |
| Năm: |
1997 |
|
| [2] J. Felsenstein and J. Felenstein, Inferring phylogenies, vol. 2. Sinauer asso- ciates Sunderland, MA, 2004 |
Sách, tạp chí |
| Tiêu đề: |
Inferring phylogenies |
| Tác giả: |
J. Felsenstein, J. Felenstein |
| Nhà XB: |
Sinauer associates |
| Năm: |
2004 |
|
| [3] M. Salemi and A.-M. Vandamme, “The phylogenetic handbook. a practical approach to dna and protein phylogeny,” 2003 |
Sách, tạp chí |
| Tiêu đề: |
The phylogenetic handbook. a practical approach to dna and protein phylogeny |
| Tác giả: |
M. Salemi, A.-M. Vandamme |
| Năm: |
2003 |
|
| [4] S. Q. Le and O. Gascuel, “An improved general amino acid replacement matrix,” Molecular biology and evolution, vol. 25, no. 7, pp. 1307–1320, 2008 |
Sách, tạp chí |
| Tiêu đề: |
An improved general amino acid replacement matrix |
| Tác giả: |
S. Q. Le, O. Gascuel |
| Nhà XB: |
Molecular biology and evolution |
| Năm: |
2008 |
|
| [5] M. Dayhoff, R. Schwartz, and B. Orcutt, “A model of evolutionary change in proteins,” in Atlas of protein sequence and structure, vol. 5, pp. 345–352, National Biomedical Research Foundation Silver Spring, 1978 |
Sách, tạp chí |
| Tiêu đề: |
Atlas of protein sequence and structure |
| Tác giả: |
M. Dayhoff, R. Schwartz, B. Orcutt |
| Nhà XB: |
National Biomedical Research Foundation Silver Spring |
| Năm: |
1978 |
|
| [6] D. T. Jones, W. R. Taylor, and J. M. Thornton, “The rapid generation of mutation data matrices from protein sequences,” Bioinformatics, vol. 8, no. 3, pp. 275–282, 1992 |
Sách, tạp chí |
| Tiêu đề: |
The rapid generation of mutation data matrices from protein sequences |
| Tác giả: |
D. T. Jones, W. R. Taylor, J. M. Thornton |
| Nhà XB: |
Bioinformatics |
| Năm: |
1992 |
|
| [7] J. Adachi and M. Hasegawa, “Model of amino acid substitution in proteins encoded by mitochondrial dna,” Journal of molecular evolution, vol. 42, no. 4, pp. 459–468, 1996 |
Sách, tạp chí |
| Tiêu đề: |
Model of amino acid substitution in proteins encoded by mitochondrial dna |
| Tác giả: |
J. Adachi, M. Hasegawa |
| Nhà XB: |
Journal of molecular evolution |
| Năm: |
1996 |
|
| [8] S. Whelan and N. Goldman, “A general empirical model of protein evolu- tion derived from multiple protein families using a maximum-likelihood ap- proach,” Molecular biology and evolution, vol. 18, no. 5, pp. 691–699, 2001 |
Sách, tạp chí |
| Tiêu đề: |
A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach |
| Tác giả: |
S. Whelan, N. Goldman |
| Nhà XB: |
Molecular biology and evolution |
| Năm: |
2001 |
|
| [9] M. W. Dimmic, J. S. Rest, D. P. Mindell, and R. A. Goldstein, “rtrev: an amino acid substitution matrix for inference of retrovirus and reverse tran- scriptase phylogeny,” Journal of molecular evolution, vol. 55, no. 1, pp. 65–73, 2002 |
Sách, tạp chí |
| Tiêu đề: |
rtrev: an amino acid substitution matrix for inference of retrovirus and reverse transcriptase phylogeny |
| Tác giả: |
M. W. Dimmic, J. S. Rest, D. P. Mindell, R. A. Goldstein |
| Nhà XB: |
Journal of molecular evolution |
| Năm: |
2002 |
|
| [10] D. C. Nickle, L. Heath, M. A. Jensen, P. B. Gilbert, J. I. Mullins, and S. L. K.Pond, “Hiv-specific probabilistic models of protein evolution,” PLoS One, vol. 2, no. 6, p. e503, 2007 |
Sách, tạp chí |
| Tiêu đề: |
Hiv-specific probabilistic models of protein evolution |
| Tác giả: |
D. C. Nickle, L. Heath, M. A. Jensen, P. B. Gilbert, J. I. Mullins, S. L. K. Pond |
| Nhà XB: |
PLoS One |
| Năm: |
2007 |
|
| [11] C. C. Dang, Q. S. Le, O. Gascuel, and V. S. Le, “Flu, an amino acid substitu- tion model for influenza proteins,” BMC evolutionary biology, vol. 10, no. 1, p. 99, 2010 |
Sách, tạp chí |
| Tiêu đề: |
Flu, an amino acid substitution model for influenza proteins |
| Tác giả: |
C. C. Dang, Q. S. Le, O. Gascuel, V. S. Le |
| Nhà XB: |
BMC evolutionary biology |
| Năm: |
2010 |
|
| [12] J. R. Brister, D. Ako-Adjei, Y. Bao, and O. Blinkova, “Ncbi viral genomes resource,” Nucleic acids research, vol. 43, no. D1, pp. D571–D577, 2014 |
Sách, tạp chí |
| Tiêu đề: |
Ncbi viral genomesresource |
|
| [13] L. Pray, “Discovery of dna structure and function: Watson and crick,” Nature Education, vol. 1, no. 1, p. 100, 2008 |
Sách, tạp chí |
| Tiêu đề: |
Discovery of dna structure and function: Watson and crick |
|
| [15] S. B. Needleman and C. D. Wunsch, “A general method applicable to the search for similarities in the amino acid sequence of two proteins,” Journal of Molecular Biology, vol. 48, pp. 443–453, Mar. 1970 |
Sách, tạp chí |
| Tiêu đề: |
A general method applicable to the search for similarities in the amino acid sequence of two proteins |
| Tác giả: |
S. B. Needleman, C. D. Wunsch |
| Nhà XB: |
Journal of Molecular Biology |
| Năm: |
1970 |
|
| [16] M. S. Waterman, Introduction to computational biology: maps, sequences and genomes. Chapman and Hall/CRC, 2018 |
Sách, tạp chí |
| Tiêu đề: |
Introduction to computational biology: maps, sequences and genomes |
| Tác giả: |
M. S. Waterman |
| Nhà XB: |
Chapman and Hall/CRC |
| Năm: |
2018 |
|
| [17] J. D. Thompson, D. G. Higgins, and T. J. Gibson, “Clustal w: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice,” Nucleic acids research, vol. 22, no. 22, pp. 4673–4680, 1994 |
Sách, tạp chí |
| Tiêu đề: |
Clustal w: improvingthe sensitivity of progressive multiple sequence alignment through sequenceweighting, position-specific gap penalties and weight matrix choice |
|
| [18] R. C. Edgar, “Muscle: multiple sequence alignment with high accuracy and high throughput,” Nucleic acids research, vol. 32, no. 5, pp. 1792–1797, 2004 |
Sách, tạp chí |
| Tiêu đề: |
Muscle: multiple sequence alignment with high accuracy and high throughput |
| Tác giả: |
R. C. Edgar |
| Nhà XB: |
Nucleic acids research |
| Năm: |
2004 |
|
| [19] K. Strimmer, A. von Haeseler, A.-M. Salemi, et al., “Nucleotide substitution models,” in The Phylogenetics Handbook A Practical Approach to DNA and Protein Phylogeny, pp. 72–100, Cambridge University Press, 2003 |
Sách, tạp chí |
| Tiêu đề: |
The Phylogenetics Handbook A Practical Approach to DNA and Protein Phylogeny |
| Tác giả: |
K. Strimmer, A. von Haeseler, A.-M. Salemi |
| Nhà XB: |
Cambridge University Press |
| Năm: |
2003 |
|
| [20] J. Keilson, Markov chain models—rarity and exponentiality, vol. 28.Springer Science & Business Media, 2012 |
Sách, tạp chí |
| Tiêu đề: |
Markov chain models—rarity and exponentiality |
| Tác giả: |
J. Keilson |
| Nhà XB: |
Springer Science & Business Media |
| Năm: |
2012 |
|
| [22] W. M. Fitch and E. Margoliash, “A method for estimating the number of invariant amino acid coding positions in a gene using cytochrome c as a model case,” Biochemical genetics, vol. 1, no. 1, pp. 65–71, 1967 |
Sách, tạp chí |
| Tiêu đề: |
A method for estimating the number of invariant amino acid coding positions in a gene using cytochrome c as a model case |
| Tác giả: |
W. M. Fitch, E. Margoliash |
| Nhà XB: |
Biochemical genetics |
| Năm: |
1967 |
|